Pseudomonas putida HB3267, B479_00725

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_00725
Name
Replicon chromosome
Genomic location 161279 - 162178 (+ strand)

Cross-References

RefSeq YP_007227006.1
GI 431800103
Entrez 14286554
INSDC AGA71063.1
NCBI Locus Tag B479_00725
UniParc UPI0002A17964
UniProtKB Acc L0FDP9
UniProtKB ID L0FDP9_PSEPU
UniRef100 UniRef100_L0FDP9
UniRef50 UniRef50_Q48QH1
UniRef90 UniRef90_Q88RQ0

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.63
Kyte-Doolittle Hydrophobicity Value -0.070
Molecular Weight (kDa) 33.4
Isoelectric Point (pI) 7.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 513 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000032 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_00725

Human Homologs

References

No references are associated with this feature.