Pseudomonas putida HB3267, B479_02370

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_02370
Name
Replicon chromosome
Genomic location 559295 - 560206 (- strand)

Cross-References

RefSeq YP_007227333.1
GI 431800430
Entrez 14286881
NCBI Locus Tag B479_02370

Product

Feature Type CDS
Coding Frame 1
Product Name
pyrroloquinoline quinone biosynthesis protein PqqB
Synonyms
Evidence for Translation
Charge (pH 7) -8.08
Kyte-Doolittle Hydrophobicity Value -0.252
Molecular Weight (kDa) 33351.6
Isoelectric Point (pI) 5.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3JXP BIOSYNTHETIC PROTEIN 09/21/09 Crystal Structure of the Coenzyme PQQ Synthesis Protein (PqqB) from Pseudomonas putida Pseudomonas putida 2.2 X-RAY DIFFRACTION 96.0
4Z6X HYDROLASE 04/06/15 The 1.68-angstrom crystal structure of acitive-site metal-free PqqB from Pseudomonas putida Pseudomonas putida (strain KT2440) 1.68 X-RAY DIFFRACTION 96.0
4Z67 HORMONE 04/03/15 The 1.5-angstrom crystal structure of Mn(2+)-bound PqqB from Pseudomonas Putida Pseudomonas putida (strain KT2440) 1.5 X-RAY DIFFRACTION 96.0
4Z60 HYDROLASE 04/03/15 The 2.5-angstrom of crystal structure of Zn(2+)-bound PqqB from Pseudomonas Putida Pseudomonas putida (strain KT2440) 2.5 X-RAY DIFFRACTION 96.0
1XTO STRUCTURAL GENOMICS, UNKNOWN FUNCTION 10/22/04 Crystal Structure of the Coenzyme PQQ Synthesis Protein (PqqB) from Pseudomonas putida, Northeast Structural Genomics Target PpR6 Pseudomonas putida 2.8 X-RAY DIFFRACTION 96.4
4Z5Z HYDROLASE 04/03/15 The 2.5-angstrom crystal structure of Mg(2+)-bound PqqB from Pseudomonas Putida Pseudomonas putida (strain KT2440) 2.54 X-RAY DIFFRACTION 96.0
6E13 OXIDOREDUCTASE 07/09/18 Pseudomonas putida PqqB with a non-physiological zinc at the active site binds the substrate mimic, 5-cysteinyl-3,4-dihydroxyphenylalanine (5-Cys-DOPA), non-specifically but supports the proposed function of the enzyme in pyrroloquinoline quinone biosynthesis. Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) 2.349 X-RAY DIFFRACTION 95.7
4Z5Y HYDROLASE 04/03/15 The 1.56-angstrom crystal structure of copper(II)-bound PqqB from Pseudomonas Putida Pseudomonas putida (strain KT2440) 1.561 X-RAY DIFFRACTION 96.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 97 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003447 (525 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_02370

Human Homologs

References

No references are associated with this feature.