Pseudomonas putida HB3267, B479_06230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_06230
Name
Replicon chromosome
Genomic location 1396786 - 1397712 (- strand)

Cross-References

RefSeq YP_007228105.1
GI 431801202
Entrez 14287653
INSDC AGA72162.1
NCBI Locus Tag B479_06230
UniParc UPI00021734B5
UniProtKB Acc L0FFT3
UniProtKB ID L0FFT3_PSEPU
UniRef100 UniRef100_A0A099MWS3
UniRef50 UniRef50_C1DSP6
UniRef90 UniRef90_Q4KHB2

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.50
Kyte-Doolittle Hydrophobicity Value -0.070
Molecular Weight (kDa) 34.3
Isoelectric Point (pI) 6.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 539 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002230 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_06230

Human Homologs

References

No references are associated with this feature.