Pseudomonas putida HB3267, B479_08315

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_08315
Name
Replicon chromosome
Genomic location 1864632 - 1867241 (+ strand)

Cross-References

RefSeq YP_007228518.1
GI 431801615
EC Number 5.99.1.2
Entrez 14288066
INSDC AGA72575.1
NCBI Locus Tag B479_08315
UniParc UPI0002A1750B
UniProtKB Acc L0FIV6
UniProtKB ID L0FIV6_PSEPU
UniRef100 UniRef100_A0A0B5KKR4
UniRef50 UniRef50_Q9HZJ5
UniRef90 UniRef90_Q4KFC2

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA topoisomerase I subunit omega
Synonyms
Evidence for Translation
Charge (pH 7) 6.98
Kyte-Doolittle Hydrophobicity Value -0.585
Molecular Weight (kDa) 97.2
Isoelectric Point (pI) 8.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 665 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002571 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_08315

Human Homologs

References

No references are associated with this feature.