Pseudomonas putida HB3267, B479_09555

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_09555
Name
Replicon chromosome
Genomic location 2125177 - 2126043 (- strand)

Cross-References

RefSeq YP_007228758.1
GI 431801855
Entrez 14288306
INSDC AGA72815.1
NCBI Locus Tag B479_09555
UniParc UPI0002A161E9
UniProtKB Acc L0FJH3
UniProtKB ID L0FJH3_PSEPU
UniRef100 UniRef100_L0FJH3
UniRef50 UniRef50_Q4KC73
UniRef90 UniRef90_Q1IC60

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -5.16
Kyte-Doolittle Hydrophobicity Value -0.138
Molecular Weight (kDa) 32332.6
Isoelectric Point (pI) 5.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 497 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003549 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_09555

Human Homologs

References

No references are associated with this feature.