Pseudomonas putida HB3267, B479_09560

Gene Feature Overview

Strain	Pseudomonas putida HB3267 GCF_000325725.1|latest
Locus Tag	B479_09560
Name
Replicon	chromosome
Genomic location	2126224 - 2128113 (+ strand)

Cross-References

RefSeq	YP_007228759.1
GI	431801856
Entrez	14288307
INSDC	AGA72816.1
NCBI Locus Tag	B479_09560
UniParc	UPI0002A1543D
UniProtKB Acc	L0FJA2
UniProtKB ID	L0FJA2_PSEPU
UniRef100	UniRef100_L0FJA2
UniRef50	UniRef50_P28812
UniRef90	UniRef90_A0A088P233

Product

Feature Type	CDS
Coding Frame	1
Product Name	AMP-dependent synthetase and ligase
Synonyms
Evidence for Translation
Charge (pH 7)	-7.99
Kyte-Doolittle Hydrophobicity Value	-0.152
Molecular Weight (kDa)	68977.1
Isoelectric Point (pI)	6.36

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 594 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002098 (357 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: B479_09560 Search term: AMP-dependent synthetase and ligase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000449535 acyl-CoA synthetase short chain family member 3 [Source:HGNC Symbol;Acc:HGNC:24723] E-value: 8.7e-187 Percent Identity: 49.8

References