Pseudomonas putida HB3267, B479_10840
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida HB3267
GCF_000325725.1|latest |
| Locus Tag |
B479_10840
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2370290 - 2370922 (- strand) |
Cross-References
| RefSeq | YP_007229009.1 |
| GI | 431802106 |
| Entrez | 14288557 |
| INSDC | AGA73066.1 |
| NCBI Locus Tag | B479_10840 |
| UniParc | UPI0002A16EAE |
| UniProtKB Acc | L0FK25 |
| UniProtKB ID | L0FK25_PSEPU |
| UniRef100 | UniRef100_L0FK25 |
| UniRef50 | UniRef50_A6V3X5 |
| UniRef90 | UniRef90_L0FK25 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
NAD-dependent DNA ligase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.62 |
| Kyte-Doolittle Hydrophobicity Value | -0.274 |
| Molecular Weight (kDa) | 23400.4 |
| Isoelectric Point (pI) | 5.61 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 32 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG024078 (58 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: B479_10840
Search term: NAD-dependent DNA ligase
|
Human Homologs
References
No references are associated with this feature.