Pseudomonas putida HB3267, B479_10850

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_10850
Name
Replicon chromosome
Genomic location 2371423 - 2372331 (- strand)

Cross-References

RefSeq YP_007229011.1
GI 431802108
Entrez 14288559
INSDC AGA73068.1
NCBI Locus Tag B479_10850
UniParc UPI0002A1556E
UniProtKB Acc L0FJ98
UniProtKB ID L0FJ98_PSEPU
UniRef100 UniRef100_L0FJ98
UniRef50 UniRef50_Q4K947
UniRef90 UniRef90_F8G1E9

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.88
Kyte-Doolittle Hydrophobicity Value -0.175
Molecular Weight (kDa) 34276.0
Isoelectric Point (pI) 6.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 513 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020733 (82 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_10850

Human Homologs

References

No references are associated with this feature.