Pseudomonas putida HB3267, B479_10870

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_10870
Name
Replicon chromosome
Genomic location 2376565 - 2377989 (- strand)

Cross-References

RefSeq YP_007229015.1
GI 431802112
Entrez 14288563
INSDC AGA73072.1
NCBI Locus Tag B479_10870
UniParc UPI0002A154B6
UniProtKB Acc L0FIG9
UniProtKB ID L0FIG9_PSEPU
UniRef100 UniRef100_V9WW60
UniRef50 UniRef50_I0HUZ5
UniRef90 UniRef90_I7B2C8

Product

Feature Type CDS
Coding Frame 1
Product Name
GntR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.00
Kyte-Doolittle Hydrophobicity Value -0.158
Molecular Weight (kDa) 53.0
Isoelectric Point (pI) 7.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 607 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015760 (42 members)
Putative Inparalogs 1 predicted inparalogs
GntR family transcriptional regulator (B479_07050) 51.3% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_10870

Human Homologs

References

No references are associated with this feature.