Pseudomonas putida HB3267, B479_10890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_10890
Name
Replicon chromosome
Genomic location 2381145 - 2382014 (- strand)

Cross-References

RefSeq YP_007229019.1
GI 431802116
Entrez 14288567
INSDC AGA73076.1
NCBI Locus Tag B479_10890
UniParc UPI0002A16873
UniProtKB Acc L0FK34
UniProtKB ID L0FK34_PSEPU
UniRef100 UniRef100_L0FK34
UniRef50 UniRef50_Q4K9M0
UniRef90 UniRef90_Q88JV0

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.53
Kyte-Doolittle Hydrophobicity Value -0.026
Molecular Weight (kDa) 31978.4
Isoelectric Point (pI) 6.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 546 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003794 (415 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_10890

Human Homologs

References

No references are associated with this feature.