Pseudomonas putida HB3267, B479_10975

Gene Feature Overview

Strain	Pseudomonas putida HB3267 GCF_000325725.1|latest
Locus Tag	B479_10975
Name
Replicon	chromosome
Genomic location	2412628 - 2413326 (- strand)

Cross-References

RefSeq	YP_007229036.1
GI	431802133
Entrez	14288584
INSDC	AGA73093.1
NCBI Locus Tag	B479_10975
UniParc	UPI0002173C67
UniProtKB Acc	L0FJB8
UniProtKB ID	L0FJB8_PSEPU
UniRef100	UniRef100_A0A099MZH1
UniRef50	UniRef50_Q9I4C8
UniRef90	UniRef90_Q88JT3

Product

Feature Type	CDS
Coding Frame	1
Product Name	pirin domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-9.59
Kyte-Doolittle Hydrophobicity Value	-0.412
Molecular Weight (kDa)	25.8
Isoelectric Point (pI)	5.16

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 400 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001167 (530 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: B479_10975 Search term: pirin domain-containing protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000369785 pirin [Source:HGNC Symbol;Acc:HGNC:30048] E-value: 2.9e-10 Percent Identity: 35.0
Ensembl 110, assembly GRCh38.p14	ENSP00000369786 pirin [Source:HGNC Symbol;Acc:HGNC:30048] E-value: 2.9e-10 Percent Identity: 35.0

References