Pseudomonas putida HB3267, B479_14090

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_14090
Name
Replicon chromosome
Genomic location 3095659 - 3096234 (+ strand)

Cross-References

RefSeq YP_007229655.1
GI 431802752
Entrez 14289203
INSDC AGA73712.1
NCBI Locus Tag B479_14090
UniParc UPI0001FB901E
UniProtKB Acc L0FK98
UniProtKB ID L0FK98_PSEPU
UniRef100 UniRef100_L0FK98
UniRef50 UniRef50_B5E876
UniRef90 UniRef90_S3NQT8

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.48
Kyte-Doolittle Hydrophobicity Value -0.594
Molecular Weight (kDa) 21712.8
Isoelectric Point (pI) 8.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 109 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000082 (1260 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_14090

Human Homologs

References

No references are associated with this feature.