Pseudomonas putida HB3267, B479_14115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_14115
Name
Replicon chromosome
Genomic location 3101111 - 3103708 (+ strand)

Cross-References

RefSeq YP_007229660.1
GI 431802757
Entrez 14289208
INSDC AGA73717.1
NCBI Locus Tag B479_14115
UniParc UPI0002A151F1
UniProtKB Acc L0FKA3
UniProtKB ID L0FKA3_PSEPU
UniRef100 UniRef100_A0A0B5KAA1
UniRef50 UniRef50_D7HTI3
UniRef90 UniRef90_I7C5A5

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion ATPase
Synonyms
Evidence for Translation
Charge (pH 7) -12.79
Kyte-Doolittle Hydrophobicity Value -0.182
Molecular Weight (kDa) 94.7
Isoelectric Point (pI) 5.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000089 (1199 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_14115

Human Homologs

Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 2.3e-37
Percent Identity: 34.5
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 2.3e-37
Percent Identity: 34.5
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 2.3e-37
Percent Identity: 34.5
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 2.3e-37
Percent Identity: 34.5
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 2.3e-37
Percent Identity: 34.5

References

No references are associated with this feature.