Pseudomonas putida HB3267, B479_14125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_14125
Name
Replicon chromosome
Genomic location 3104452 - 3105795 (+ strand)

Cross-References

RefSeq YP_007229662.1
GI 431802759
Entrez 14289210
INSDC AGA73719.1
NCBI Locus Tag B479_14125
UniParc UPI000217409E
UniProtKB Acc L0FID3
UniProtKB ID L0FID3_PSEPU
UniRef100 UniRef100_A0A099N2C7
UniRef50 UniRef50_Q88IA6
UniRef90 UniRef90_Q88IA6

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.55
Kyte-Doolittle Hydrophobicity Value -0.234
Molecular Weight (kDa) 50.3
Isoelectric Point (pI) 6.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 109 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000078 (882 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_14125

Human Homologs

References

No references are associated with this feature.