Pseudomonas putida HB3267, B479_14150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_14150
Name
Replicon chromosome
Genomic location 3113883 - 3114401 (+ strand)

Cross-References

RefSeq YP_007229667.1
GI 431802764
Entrez 14289215
INSDC AGA73724.1
NCBI Locus Tag B479_14150
UniParc UPI00021740A3
UniProtKB Acc L0FID7
UniProtKB ID L0FID7_PSEPU
UniRef100 UniRef100_A0A099N2D1
UniRef50 UniRef50_Q88DE1
UniRef90 UniRef90_Q88IB0

Product

Feature Type CDS
Coding Frame 1
Product Name
Hcp1 family type VI secretion system effector
Synonyms
Evidence for Translation
Charge (pH 7) -1.35
Kyte-Doolittle Hydrophobicity Value -0.292
Molecular Weight (kDa) 18.5
Isoelectric Point (pI) 6.27

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 74 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016074 (38 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_14150

Human Homologs

References

No references are associated with this feature.