Pseudomonas putida HB3267, B479_20630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_20630
Name
Replicon chromosome
Genomic location 4538584 - 4541430 (+ strand)

Cross-References

RefSeq YP_007230961.1
GI 431804058
Entrez 14290509
NCBI Locus Tag B479_20630

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent helicase HepA
Synonyms
Evidence for Translation
Charge (pH 7) -42.83
Kyte-Doolittle Hydrophobicity Value -0.253
Molecular Weight (kDa) 105994.9
Isoelectric Point (pI) 4.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 318 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002310 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_20630

Human Homologs

Ensembl 110, assembly GRCh38.p14
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value: 4.5e-09
Percent Identity: 21.4
Ensembl 110, assembly GRCh38.p14
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value: 4.5e-09
Percent Identity: 21.4
Ensembl 110, assembly GRCh38.p14
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value: 4.5e-09
Percent Identity: 21.4
Ensembl 110, assembly GRCh38.p14
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value: 4.5e-09
Percent Identity: 21.4
Ensembl 110, assembly GRCh38.p14
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value: 4.5e-09
Percent Identity: 21.4

References

No references are associated with this feature.