Pseudomonas putida HB3267, B479_20780

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_20780
Name
Replicon chromosome
Genomic location 4569884 - 4571224 (+ strand)

Cross-References

RefSeq YP_007230989.1
GI 431804086
Entrez 14290537
INSDC AGA75046.1
NCBI Locus Tag B479_20780
UniParc UPI0002A155E0
UniProtKB Acc L0FQP3
UniProtKB ID L0FQP3_PSEPU
UniRef100 UniRef100_L0FQP3
UniRef50 UniRef50_W8WWX3
UniRef90 UniRef90_F8G202

Product

Feature Type CDS
Coding Frame 1
Product Name
GntR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 12.09
Kyte-Doolittle Hydrophobicity Value -0.199
Molecular Weight (kDa) 50028.1
Isoelectric Point (pI) 9.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 618 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015270 (35 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_20780

Human Homologs

References

No references are associated with this feature.