Pseudomonas putida HB3267, B479_20800
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida HB3267
GCF_000325725.1|latest |
| Locus Tag |
B479_20800
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4575412 - 4577070 (+ strand) |
Cross-References
| RefSeq | YP_007230993.1 |
| GI | 431804090 |
| EC Number | 6.5.1.1 |
| Entrez | 14290541 |
| NCBI Locus Tag | B479_20800 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent DNA ligase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.37 |
| Kyte-Doolittle Hydrophobicity Value | -0.222 |
| Molecular Weight (kDa) | 62083.8 |
| Isoelectric Point (pI) | 8.21 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 257 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG015267 (182 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: B479_20800
Search term: ATP-dependent DNA ligase
|
Human Homologs
References
No references are associated with this feature.