Pseudomonas putida HB3267, B479_20810

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_20810
Name
Replicon chromosome
Genomic location 4578477 - 4580930 (+ strand)

Cross-References

RefSeq YP_007230995.1
GI 431804092
Entrez 14290543
NCBI Locus Tag B479_20810

Product

Feature Type CDS
Coding Frame 1
Product Name
DEAD/DEAH box helicase
Synonyms
Evidence for Translation
Charge (pH 7) 23.45
Kyte-Doolittle Hydrophobicity Value -0.107
Molecular Weight (kDa) 90260.0
Isoelectric Point (pI) 10.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 386 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015266 (169 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_20810

Human Homologs

Ensembl 107, assembly GRCh38.p13
activating signal cointegrator 1 complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:18697]
E-value: 2.8e-12
Percent Identity: 26.3

References

No references are associated with this feature.