Pseudomonas putida HB3267, B479_23175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_23175
Name
Replicon chromosome
Genomic location 5112349 - 5112510 (+ strand)

Cross-References

RefSeq YP_007231467.1
GI 431804564
Entrez 14291015
INSDC AGA75524.1
NCBI Locus Tag B479_23175
UniParc UPI0002A175E6
UniProtKB Acc L0FNM7
UniProtKB ID L0FNM7_PSEPU
UniRef100 UniRef100_L0FNM7
UniRef50 UniRef50_F8H7M7
UniRef90 UniRef90_L0FNM7

Product

Feature Type CDS
Coding Frame 1
Product Name
transposase IS66
Synonyms
Evidence for Translation
Charge (pH 7) 3.46
Kyte-Doolittle Hydrophobicity Value -0.030
Molecular Weight (kDa) 5686.5
Isoelectric Point (pI) 10.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 21 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG014674 (58 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_23175
Search term: transposase IS66

Human Homologs

References

No references are associated with this feature.