Pseudomonas syringae pv. syringae B728a, Psyr_0008

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0008
Name
Replicon chromosome
Genomic location 9410 - 10384 (+ strand)

Cross-References

RefSeq YP_233120.1
GI 66043279
Entrez 3365483
INSDC AAY35082.1
NCBI Locus Tag Psyr_0008
UniParc UPI0000394ED2
UniProtKB Acc Q500U0
UniProtKB ID Q500U0_PSEU2
UniRef100 UniRef100_Q500U0
UniRef50 UniRef50_Q500U0
UniRef90 UniRef90_Q500U0

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.82
Kyte-Doolittle Hydrophobicity Value -0.270
Molecular Weight (kDa) 36620.0
Isoelectric Point (pI) 8.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 186 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001594 (790 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0008

Human Homologs

References

No references are associated with this feature.