Pseudomonas syringae pv. syringae B728a, Psyr_0023

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0023
Name
Replicon chromosome
Genomic location 26572 - 27549 (- strand)

Cross-References

RefSeq YP_233135.1
GI 66043294
Entrez 3365498
INSDC AAY35097.1
NCBI Locus Tag Psyr_0023
UniParc UPI0000394EE1
UniProtKB Acc Q500S5
UniProtKB ID Q500S5_PSEU2
UniRef100 UniRef100_Q500S5
UniRef50 UniRef50_P28304
UniRef90 UniRef90_Q88B47

Product

Feature Type CDS
Coding Frame 1
Product Name
zinc-containing alcohol dehydrogenase superfamily protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.14
Kyte-Doolittle Hydrophobicity Value 0.087
Molecular Weight (kDa) 34183.8
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3JYL OXIDOREDUCTASE 09/22/09 Crystal structures of Pseudomonas syringae pv. Tomato DC3000 quinone oxidoreductase Pseudomonas syringae pv. tomato 2.4 X-RAY DIFFRACTION 95.4
3JYN OXIDOREDUCTASE 09/22/09 Crystal structures of Pseudomonas syringae pv. Tomato DC3000 quinone oxidoreductase complexed with NADPH Pseudomonas syringae pv. tomato 2.01 X-RAY DIFFRACTION 95.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 504 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000023 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0023

Human Homologs

References

No references are associated with this feature.