Pseudomonas syringae pv. syringae B728a, Psyr_0024

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_0024
Name
Replicon chromosome
Genomic location 27721 - 28635 (+ strand)

Cross-References

RefSeq YP_233136.1
GI 66043295
EC Number 1.3.3.3
Entrez 3365499
INSDC AAY35098.1
NCBI Locus Tag Psyr_0024
UniParc UPI0000394EE2
UniProtKB Acc Q500S4
UniProtKB ID HEM6_PSEU2
UniRef100 UniRef100_Q500S4
UniRef50 UniRef50_P84155
UniRef90 UniRef90_Q88B49

Product

Feature Type CDS
Coding Frame 1
Product Name
coproporphyrinogen III oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -7.47
Kyte-Doolittle Hydrophobicity Value -0.445
Molecular Weight (kDa) 34.6
Isoelectric Point (pI) 5.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 278 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000024 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0024

Human Homologs

Ensembl 97, assembly GRCh38.p12
coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:HGNC:2321]
E-value: 4.1e-74
Percent Identity: 45.4

References

No references are associated with this feature.