Pseudomonas syringae pv. syringae B728a, Psyr_0040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0040
Name
Replicon chromosome
Genomic location 42698 - 43129 (+ strand)

Cross-References

RefSeq YP_233152.1
GI 66043311
Entrez 3365515
INSDC AAY35114.1
NCBI Locus Tag Psyr_0040
UniParc UPI0000394EF2
UniProtKB Acc Q500Q8
UniProtKB ID Q500Q8_PSEU2
UniRef100 UniRef100_Q500Q8
UniRef50 UniRef50_S5S122
UniRef90 UniRef90_Q48QG0

Product

Feature Type CDS
Coding Frame 1
Product Name
OsmC-like protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.35
Kyte-Doolittle Hydrophobicity Value 0.014
Molecular Weight (kDa) 14.8
Isoelectric Point (pI) 5.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 245 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000058 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0040
Search term: OsmC-like protein

Human Homologs

References

No references are associated with this feature.