Pseudomonas syringae pv. syringae B728a, Psyr_0055

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0055
Name
Replicon chromosome
Genomic location 56138 - 56815 (+ strand)

Cross-References

RefSeq YP_233167.1
GI 66043326
Entrez 3365530
INSDC AAY35129.1
NCBI Locus Tag Psyr_0055
UniParc UPI0000394F01
UniProtKB Acc Q500P3
UniProtKB ID Q500P3_PSEU2
UniRef100 UniRef100_Q500P3
UniRef50 UniRef50_Q88RE0
UniRef90 UniRef90_Q88B84

Product

Feature Type CDS
Coding Frame 1
Product Name
FKBP-type peptidyl-prolyl isomerase, N-terminal:peptidylprolyl isomerase, FKBP-type
Synonyms
Evidence for Translation
Charge (pH 7) -11.28
Kyte-Doolittle Hydrophobicity Value -0.165
Molecular Weight (kDa) 24.2
Isoelectric Point (pI) 4.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5XB0 ISOMERASE 03/15/17 1.6 A crystal structure of peptidyl-prolyl cis-trans isomerase PPIase from Pseudomonas syringae pv. tomato str. DC3000 (PSPTO DC3000) [Pseudomonas syringae] pv. tomato str. DC3000 1.6 X-RAY DIFFRACTION 94.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 343 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004835 (488 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0055

Human Homologs

References

No references are associated with this feature.