Pseudomonas syringae pv. syringae B728a, Psyr_0325

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_0325
Name
Replicon	chromosome
Genomic location	343698 - 345008 (+ strand)

Cross-References

RefSeq	YP_233435.1
GI	66043594
Entrez	3365801
INSDC	AAY35397.1
NCBI Locus Tag	Psyr_0325
UniParc	UPI000050D65C
UniProtKB Acc	Q4ZZM5
UniProtKB ID	Q4ZZM5_PSEU2
UniRef100	UniRef100_Q4ZZM5
UniRef50	UniRef50_P0AA79
UniRef90	UniRef90_S3MAJ9

Product

Feature Type	CDS
Coding Frame	1
Product Name	general substrate transporter:TonB box, N-terminal
Synonyms
Evidence for Translation
Charge (pH 7)	6.95
Kyte-Doolittle Hydrophobicity Value	0.551
Molecular Weight (kDa)	47324.2
Isoelectric Point (pI)	8.68

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 344 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018923 (60 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_0325 Search term: general substrate transporter:TonB box, N-terminal

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000380250 solute carrier family 17 member 3 [Source:HGNC Symbol;Acc:HGNC:10931] E-value: 1.2e-14 Percent Identity: 26.5

References