Pseudomonas syringae pv. syringae B728a, Psyr_0327

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0327
Name
Replicon chromosome
Genomic location 345887 - 346837 (+ strand)

Cross-References

RefSeq YP_233437.1
GI 66043596
Entrez 3365803
INSDC AAY35399.1
NCBI Locus Tag Psyr_0327
UniParc UPI0000395004
UniProtKB Acc Q4ZZM3
UniProtKB ID Q4ZZM3_PSEU2
UniRef100 UniRef100_Q4ZZM3
UniRef50 UniRef50_G8PZD5
UniRef90 UniRef90_D7HUQ9

Product

Feature Type CDS
Coding Frame 1
Product Name
sigma-54 factor, interaction region
Synonyms
Evidence for Translation
Charge (pH 7) -5.86
Kyte-Doolittle Hydrophobicity Value -0.159
Molecular Weight (kDa) 34569.8
Isoelectric Point (pI) 5.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 448 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001743 (489 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0327

Human Homologs

References

No references are associated with this feature.