Pseudomonas syringae pv. syringae B728a, Psyr_0345

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0345
Name
Replicon chromosome
Genomic location 367896 - 368981 (+ strand)

Cross-References

RefSeq YP_233455.1
GI 66043614
Entrez 3365821
INSDC AAY35417.1
NCBI Locus Tag Psyr_0345
UniParc UPI0000395015
UniProtKB Acc Q4ZZK5
UniProtKB ID Q4ZZK5_PSEU2
UniRef100 UniRef100_Q4ZZK5
UniRef50 UniRef50_G8PZD9
UniRef90 UniRef90_Q87UV0

Product

Feature Type CDS
Coding Frame 1
Product Name
secretion protein HlyD
Synonyms
Evidence for Translation
Charge (pH 7) -0.80
Kyte-Doolittle Hydrophobicity Value -0.329
Molecular Weight (kDa) 39049.6
Isoelectric Point (pI) 6.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 397 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000155 (490 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0345

Human Homologs

References

No references are associated with this feature.