Pseudomonas syringae pv. syringae B728a, Psyr_0516

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0516
Name
Replicon chromosome
Genomic location 572766 - 574187 (- strand)

Cross-References

RefSeq YP_233624.1
GI 66043783
Entrez 3365992
INSDC AAY35586.1
NCBI Locus Tag Psyr_0516
UniParc UPI000050D687
UniProtKB Acc Q4ZZ36
UniProtKB ID Q4ZZ36_PSEU2
UniRef100 UniRef100_Q4ZZ36
UniRef50 UniRef50_P21693
UniRef90 UniRef90_Q4ZZ36

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent RNA helicase DbpA
Synonyms
Evidence for Translation
Charge (pH 7) 7.21
Kyte-Doolittle Hydrophobicity Value 0.002
Molecular Weight (kDa) 51553.2
Isoelectric Point (pI) 8.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 609 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000446 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0516

Human Homologs

Ensembl 110, assembly GRCh38.p14
eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683]
E-value: 3.1e-59
Percent Identity: 33.4
Ensembl 110, assembly GRCh38.p14
eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683]
E-value: 3.1e-59
Percent Identity: 33.4
Ensembl 110, assembly GRCh38.p14
eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683]
E-value: 3.1e-59
Percent Identity: 33.4
Ensembl 110, assembly GRCh38.p14
eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683]
E-value: 3.1e-59
Percent Identity: 33.4

References

No references are associated with this feature.