Pseudomonas syringae pv. syringae B728a, Psyr_0536
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest |
| Locus Tag |
Psyr_0536
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 604905 - 606707 (+ strand) |
Cross-References
| RefSeq | YP_233644.1 |
| GI | 66043803 |
| Entrez | 3366012 |
| NCBI Locus Tag | Psyr_0536 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter transmembrane protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.66 |
| Kyte-Doolittle Hydrophobicity Value | 0.257 |
| Molecular Weight (kDa) | 65722.6 |
| Isoelectric Point (pI) | 7.97 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004607 (553 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psyr_0536
Search term: ABC transporter transmembrane protein
|
Human Homologs
|
Ensembl
97, assembly
GRCh38.p12
|
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value:
3.9e-76
Percent Identity:
34.0
|
|
Ensembl
97, assembly
GRCh38.p12
|
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value:
3.9e-76
Percent Identity:
34.0
|
|
Ensembl
97, assembly
GRCh38.p12
|
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value:
3.9e-76
Percent Identity:
34.0
|
References
No references are associated with this feature.