Pseudomonas syringae pv. syringae B728a, Psyr_0536

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_0536
Name
Replicon chromosome
Genomic location 604905 - 606707 (+ strand)

Cross-References

RefSeq YP_233644.1
GI 66043803
Entrez 3366012
NCBI Locus Tag Psyr_0536

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter transmembrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.66
Kyte-Doolittle Hydrophobicity Value 0.257
Molecular Weight (kDa) 65722.6
Isoelectric Point (pI) 7.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004607 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0536

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 3.9e-76
Percent Identity: 34.0
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 3.9e-76
Percent Identity: 34.0
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 3.9e-76
Percent Identity: 34.0

References

No references are associated with this feature.