Pseudomonas syringae pv. syringae B728a, Psyr_0916

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_0916
Name
Replicon chromosome
Genomic location 1040489 - 1041520 (- strand)

Cross-References

RefSeq YP_234012.1
GI 66044171
Entrez 3366409
INSDC AAY35974.1
NCBI Locus Tag Psyr_0916
UniParc UPI00003951C3
UniProtKB Acc Q4ZXZ8
UniProtKB ID Q4ZXZ8_PSEU2
UniRef100 UniRef100_S3MC16
UniRef50 UniRef50_Q48MZ7
UniRef90 UniRef90_Q48MZ7

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-mannose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -5.33
Kyte-Doolittle Hydrophobicity Value -0.196
Molecular Weight (kDa) 38.6
Isoelectric Point (pI) 5.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 609 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004999 (389 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0916

Human Homologs

Ensembl 97, assembly GRCh38.p12
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value: 9.3e-107
Percent Identity: 56.3

References

No references are associated with this feature.