Pseudomonas syringae pv. syringae B728a, Psyr_1125
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest |
| Locus Tag |
Psyr_1125
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1273249 - 1274778 (- strand) |
Cross-References
| RefSeq | YP_234217.1 |
| GI | 66044376 |
| Entrez | 3366619 |
| NCBI Locus Tag | Psyr_1125 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
GGDEF
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 4.06 |
| Kyte-Doolittle Hydrophobicity Value | -0.154 |
| Molecular Weight (kDa) | 57158.6 |
| Isoelectric Point (pI) | 8.30 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 454 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG015202 (196 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psyr_1125
Search term: GGDEF
|
Human Homologs
References
No references are associated with this feature.