Pseudomonas syringae pv. syringae B728a, Psyr_1398

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_1398
Name
Replicon chromosome
Genomic location 1583712 - 1584668 (- strand)

Cross-References

RefSeq YP_234487.1
GI 66044646
Entrez 3366895
INSDC AAY36449.1
NCBI Locus Tag Psyr_1398
UniParc UPI0000395396
UniProtKB Acc Q4ZWM3
UniProtKB ID Q4ZWM3_PSEU2
UniRef100 UniRef100_Q4ZWM3
UniRef50 UniRef50_Q88NK3
UniRef90 UniRef90_Q87Y23

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -13.16
Kyte-Doolittle Hydrophobicity Value -0.490
Molecular Weight (kDa) 35.9
Isoelectric Point (pI) 5.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000921 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_1398
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.