Pseudomonas syringae pv. syringae B728a, Psyr_2096

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_2096
Name
Replicon chromosome
Genomic location 2444019 - 2444609 (+ strand)

Cross-References

RefSeq YP_235177.1
GI 66045336
Entrez 3367610
INSDC AAY37139.1
NCBI Locus Tag Psyr_2096
UniParc UPI0000394CC6
UniProtKB Acc Q4ZUN3
UniProtKB ID Q4ZUN3_PSEU2
UniRef100 UniRef100_Q4ZUN3
UniRef50 UniRef50_A4VL64
UniRef90 UniRef90_I2BLX6

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor SigX
Synonyms
Evidence for Translation
Charge (pH 7) 0.63
Kyte-Doolittle Hydrophobicity Value -0.640
Molecular Weight (kDa) 23.3
Isoelectric Point (pI) 7.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 469 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003619 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_2096

Human Homologs

References

No references are associated with this feature.