Pseudomonas syringae pv. syringae B728a, Psyr_2124

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_2124
Name
Replicon chromosome
Genomic location 2481384 - 2482733 (+ strand)

Cross-References

RefSeq YP_235205.1
GI 66045364
Entrez 3367638
INSDC AAY37167.1
NCBI Locus Tag Psyr_2124
UniParc UPI0000394CAA
UniProtKB Acc Q4ZUK5
UniProtKB ID Q4ZUK5_PSEU2
UniRef100 UniRef100_Q4ZUK5
UniRef50 UniRef50_Q51955
UniRef90 UniRef90_Q883L6

Product

Feature Type CDS
Coding Frame 1
Product Name
benzoate transport
Synonyms
Evidence for Translation
Charge (pH 7) 8.55
Kyte-Doolittle Hydrophobicity Value 0.825
Molecular Weight (kDa) 47.2
Isoelectric Point (pI) 9.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 461 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000234 (2463 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_2124

Human Homologs

Ensembl 97, assembly GRCh38.p12
synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
E-value: 4.6e-13
Percent Identity: 26.1
Ensembl 97, assembly GRCh38.p12
synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
E-value: 4.6e-13
Percent Identity: 26.1

References

No references are associated with this feature.