Pseudomonas syringae pv. syringae B728a, Psyr_2297

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_2297
Name
Replicon chromosome
Genomic location 2669287 - 2670087 (+ strand)

Cross-References

RefSeq YP_235378.1
GI 66045537
Entrez 3367812
INSDC AAY37340.1
NCBI Locus Tag Psyr_2297
UniParc UPI0000394BE8
UniProtKB Acc Q4ZU32
UniProtKB ID Q4ZU32_PSEU2
UniRef100 UniRef100_Q4ZU32
UniRef50 UniRef50_A0A085JPX1
UniRef90 UniRef90_D7I0V4

Product

Feature Type CDS
Coding Frame 1
Product Name
Short-chain dehydrogenase/reductase SDR
Synonyms
Evidence for Translation
Charge (pH 7) -2.59
Kyte-Doolittle Hydrophobicity Value 0.016
Molecular Weight (kDa) 28271.1
Isoelectric Point (pI) 6.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017890 (97 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_2297

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 2.4e-24
Percent Identity: 34.8
Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 2.4e-24
Percent Identity: 34.8
Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 2.4e-24
Percent Identity: 34.8
Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 2.4e-24
Percent Identity: 34.8
Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 2.4e-24
Percent Identity: 34.8
Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 2.4e-24
Percent Identity: 34.8

References

No references are associated with this feature.