Pseudomonas syringae pv. syringae B728a, Psyr_2438

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_2438
Name
Replicon chromosome
Genomic location 2823096 - 2823929 (- strand)

Cross-References

RefSeq YP_235515.1
GI 66045674
Entrez 3367955
INSDC AAY37477.1
NCBI Locus Tag Psyr_2438
UniParc UPI0000394F49
UniProtKB Acc Q4ZTP5
UniProtKB ID Q4ZTP5_PSEU2
UniRef100 UniRef100_Q4ZTP5
UniRef50 UniRef50_B9JAY9
UniRef90 UniRef90_S3MGP3

Product

Feature Type CDS
Coding Frame 1
Product Name
binding-protein dependent transport system inner membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 6.37
Kyte-Doolittle Hydrophobicity Value 0.727
Molecular Weight (kDa) 30.9
Isoelectric Point (pI) 9.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 394 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003174 (454 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_2438

Human Homologs

References

No references are associated with this feature.