Pseudomonas syringae pv. syringae B728a, Psyr_2628

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_2628
Name
Replicon chromosome
Genomic location 3188330 - 3189022 (- strand)

Cross-References

RefSeq YP_235705.1
GI 66045864
Entrez 3368145
NCBI Locus Tag Psyr_2628

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter
Synonyms
Evidence for Translation
Charge (pH 7) -0.41
Kyte-Doolittle Hydrophobicity Value 0.244
Molecular Weight (kDa) 24673.3
Isoelectric Point (pI) 6.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000072 (425 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_2628
Search term: ABC transporter

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
E-value: 3.2e-10
Percent Identity: 27.6
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
E-value: 3.2e-10
Percent Identity: 27.6

References

No references are associated with this feature.