Pseudomonas syringae pv. syringae B728a, Psyr_2918

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_2918
Name
Replicon chromosome
Genomic location 3506769 - 3507725 (+ strand)

Cross-References

RefSeq YP_235990.1
GI 66046149
EC Number 1.1.1.157
Entrez 3368438
INSDC AAY37952.1
NCBI Locus Tag Psyr_2918
UniParc UPI0000395893
UniProtKB Acc Q4ZSC0
UniProtKB ID LCDH_PSEU2
UniRef100 UniRef100_Q4ZSC0
UniRef50 UniRef50_Q62DG4
UniRef90 UniRef90_Q4ZSC0

Product

Feature Type CDS
Coding Frame 1
Product Name
3-hydroxybutyryl-CoA dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -4.95
Kyte-Doolittle Hydrophobicity Value 0.047
Molecular Weight (kDa) 34339.0
Isoelectric Point (pI) 6.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 436 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004945 (484 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_2918

Human Homologs

Ensembl 110, assembly GRCh38.p14
crystallin lambda 1 [Source:HGNC Symbol;Acc:HGNC:18246]
E-value: 2.3e-34
Percent Identity: 30.0

References

No references are associated with this feature.