Pseudomonas syringae pv. syringae B728a, Psyr_2928

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_2928
Name
Replicon chromosome
Genomic location 3516682 - 3518535 (+ strand)

Cross-References

RefSeq YP_236000.1
GI 66046159
Entrez 3368448
NCBI Locus Tag Psyr_2928

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter transmembrane protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.15
Kyte-Doolittle Hydrophobicity Value 0.177
Molecular Weight (kDa) 67397.2
Isoelectric Point (pI) 6.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015812 (108 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_2928

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
E-value: 1.1e-64
Percent Identity: 39.8
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
E-value: 1.1e-64
Percent Identity: 39.8

References

No references are associated with this feature.