Pseudomonas syringae pv. syringae B728a, Psyr_3175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3175
Name
Replicon chromosome
Genomic location 3802292 - 3803572 (- strand)

Cross-References

RefSeq YP_236245.1
GI 66046404
EC Number 6.1.1.11
Entrez 3368697
INSDC AAY38207.1
NCBI Locus Tag Psyr_3175
UniParc UPI0000395D5B
UniProtKB Acc Q4ZRL5
UniProtKB ID SYS_PSEU2
UniRef100 UniRef100_Q4ZRL5
UniRef50 UniRef50_Q8RH11
UniRef90 UniRef90_Q87ZS9

Product

Feature Type CDS
Coding Frame 1
Product Name
seryl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -13.17
Kyte-Doolittle Hydrophobicity Value -0.300
Molecular Weight (kDa) 47.2
Isoelectric Point (pI) 4.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002939 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3175

Human Homologs

Ensembl 110, assembly GRCh38.p14
seryl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:10537]
E-value: 5.6e-52
Percent Identity: 31.7

References

No references are associated with this feature.