Pseudomonas syringae pv. syringae B728a, Psyr_3287

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3287
Name
Replicon chromosome
Genomic location 3932531 - 3935143 (- strand)

Cross-References

RefSeq YP_236357.1
GI 66046516
EC Number 5.99.1.2
Entrez 3368814
INSDC AAY38319.1
NCBI Locus Tag Psyr_3287
UniParc UPI0000395AD8
UniProtKB Acc Q4ZRA3
UniProtKB ID Q4ZRA3_PSEU2
UniRef100 UniRef100_Q4ZRA3
UniRef50 UniRef50_Q9HZJ5
UniRef90 UniRef90_Q4KFC2

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA topoisomerase I
Synonyms
Evidence for Translation
Charge (pH 7) 10.73
Kyte-Doolittle Hydrophobicity Value -0.592
Molecular Weight (kDa) 97.0
Isoelectric Point (pI) 8.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 665 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002571 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3287

Human Homologs

References

No references are associated with this feature.