Pseudomonas syringae pv. syringae B728a, Psyr_4006

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_4006
Name
Replicon chromosome
Genomic location 4770168 - 4770827 (- strand)

Cross-References

RefSeq YP_237074.1
GI 66047233
Entrez 3369542
INSDC AAY39036.1
NCBI Locus Tag Psyr_4006
UniParc UPI000050DA8F
UniProtKB Acc Q4ZP86
UniProtKB ID Q4ZP86_PSEU2
UniRef100 UniRef100_Q4ZP86
UniRef50 UniRef50_Q9AIU0
UniRef90 UniRef90_Q48EP5

Product

Feature Type CDS
Coding Frame 1
Product Name
regulatory protein, TetR
Synonyms
Evidence for Translation
Charge (pH 7) -7.95
Kyte-Doolittle Hydrophobicity Value -0.245
Molecular Weight (kDa) 24.9
Isoelectric Point (pI) 4.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 338 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002095 (539 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4006

Human Homologs

References

No references are associated with this feature.