Pseudomonas syringae pv. syringae B728a, Psyr_4009

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4009
Name
Replicon chromosome
Genomic location 4775378 - 4776838 (+ strand)

Cross-References

RefSeq YP_237077.1
GI 66047236
Entrez 3369545
INSDC AAY39039.1
NCBI Locus Tag Psyr_4009
UniParc UPI0000395686
UniProtKB Acc Q4ZP83
UniProtKB ID Q4ZP83_PSEU2
UniRef100 UniRef100_Q4ZP83
UniRef50 UniRef50_Q9WWZ8
UniRef90 UniRef90_S3NN29

Product

Feature Type CDS
Coding Frame 1
Product Name
RND efflux system, outer membrane lipoprotein, NodT
Synonyms
Evidence for Translation
Charge (pH 7) -2.30
Kyte-Doolittle Hydrophobicity Value -0.281
Molecular Weight (kDa) 53.1
Isoelectric Point (pI) 5.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 322 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000418 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4009

Human Homologs

References

No references are associated with this feature.