Pseudomonas syringae pv. syringae B728a, Psyr_4393

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4393
Name
Replicon chromosome
Genomic location 5255165 - 5256421 (+ strand)

Cross-References

RefSeq YP_237461.1
GI 66047620
Entrez 3369933
INSDC AAY39423.1
NCBI Locus Tag Psyr_4393
UniParc UPI0000395461
UniProtKB Acc Q4ZN49
UniProtKB ID Q4ZN49_PSEU2
UniRef100 UniRef100_Q4ZN49
UniRef50 UniRef50_Q48DI9
UniRef90 UniRef90_Q48DI9

Product

Feature Type CDS
Coding Frame 1
Product Name
type II secretion system protein E
Synonyms
Evidence for Translation
Charge (pH 7) -2.45
Kyte-Doolittle Hydrophobicity Value -0.109
Molecular Weight (kDa) 46.3
Isoelectric Point (pI) 6.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 564 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003903 (475 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4393

Human Homologs

References

No references are associated with this feature.