Pseudomonas syringae pv. syringae B728a, Psyr_4678

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_4678
Name
Replicon chromosome
Genomic location 5544893 - 5546191 (- strand)

Cross-References

RefSeq YP_237743.1
GI 66047902
Entrez 3370228
INSDC AAY39705.1
NCBI Locus Tag Psyr_4678
UniParc UPI000050DB37
UniProtKB Acc Q4ZMB7
UniProtKB ID Q4ZMB7_PSEU2
UniRef100 UniRef100_Q4ZMB7
UniRef50 UniRef50_K9NQ36
UniRef90 UniRef90_D7I601

Product

Feature Type CDS
Coding Frame 1
Product Name
GGDEF
Synonyms
Evidence for Translation
Charge (pH 7) 7.70
Kyte-Doolittle Hydrophobicity Value 0.149
Molecular Weight (kDa) 48.3
Isoelectric Point (pI) 8.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 449 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015098 (225 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4678
Search term: GGDEF

Human Homologs

References

No references are associated with this feature.