Pseudomonas syringae pv. syringae B728a, Psyr_4679

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_4679
Name
Replicon chromosome
Genomic location 5546801 - 5547340 (+ strand)

Cross-References

RefSeq YP_237744.1
GI 66047903
Entrez 3370229
NCBI Locus Tag Psyr_4679

Product

Feature Type CDS
Coding Frame 1
Product Name
ISPsy9, transposase OrfA
Synonyms
Evidence for Translation
Charge (pH 7) 18.65
Kyte-Doolittle Hydrophobicity Value -0.751
Molecular Weight (kDa) 20.7
Isoelectric Point (pI) 10.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 65 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018860 (25 members)
Putative Inparalogs 4 predicted inparalogs
ISPsy9, transposase OrfA (Psyr_4617) 100.0% identity
ISPsy9, transposase OrfA (Psyr_1177) 100.0% identity
ISPsy9, transposase OrfA (Psyr_0593) 100.0% identity
ISPsy9, transposase OrfA (Psyr_0274) 100.0% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4679

Human Homologs

References

No references are associated with this feature.