Pseudomonas syringae pv. syringae B728a, Psyr_4679
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest |
| Locus Tag |
Psyr_4679
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5546801 - 5547340 (+ strand) |
Cross-References
| RefSeq | YP_237744.1 |
| GI | 66047903 |
| Entrez | 3370229 |
| NCBI Locus Tag | Psyr_4679 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ISPsy9, transposase OrfA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 18.65 |
| Kyte-Doolittle Hydrophobicity Value | -0.751 |
| Molecular Weight (kDa) | 20.7 |
| Isoelectric Point (pI) | 10.83 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 65 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG018860 (25 members) |
| Putative Inparalogs |
4 predicted inparalogs ISPsy9, transposase OrfA (Psyr_4617) 100.0% identity ISPsy9, transposase OrfA (Psyr_1177) 100.0% identity ISPsy9, transposase OrfA (Psyr_0593) 100.0% identity ISPsy9, transposase OrfA (Psyr_0274) 100.0% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psyr_4679
Search term: ISPsy9, transposase OrfA
|
Human Homologs
References
No references are associated with this feature.