Pseudomonas syringae pv. syringae B728a, Psyr_4770

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_4770
Name
Replicon chromosome
Genomic location 5646832 - 5649525 (+ strand)

Cross-References

RefSeq YP_237835.1
GI 66047994
Entrez 3370320
INSDC AAY39797.1
NCBI Locus Tag Psyr_4770
UniParc UPI000039572D
UniProtKB Acc Q4ZM25
UniProtKB ID Q4ZM25_PSEU2
UniRef100 UniRef100_Q4ZM25
UniRef50 UniRef50_Q4KJD2
UniRef90 UniRef90_D7HUZ1

Product

Feature Type CDS
Coding Frame 1
Product Name
PAS:GGDEF
Synonyms
Evidence for Translation
Charge (pH 7) -18.67
Kyte-Doolittle Hydrophobicity Value -0.308
Molecular Weight (kDa) 100.6
Isoelectric Point (pI) 5.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 489 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004624 (539 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4770
Search term: PAS:GGDEF

Human Homologs

References

No references are associated with this feature.