Pseudomonas syringae pv. syringae B728a, Psyr_4958

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_4958
Name
Replicon chromosome
Genomic location 5876740 - 5879343 (+ strand)

Cross-References

RefSeq YP_238023.1
GI 66048182
Entrez 3370510
INSDC AAY39985.1
NCBI Locus Tag Psyr_4958
UniParc UPI0000395BB4
UniProtKB Acc Q4ZLI7
UniProtKB ID Q4ZLI7_PSEU2
UniRef100 UniRef100_Q4ZLI7
UniRef50 UniRef50_D7HTI3
UniRef90 UniRef90_D7HTI3

Product

Feature Type CDS
Coding Frame 1
Product Name
ATPase AAA
Synonyms
Evidence for Translation
Charge (pH 7) -19.50
Kyte-Doolittle Hydrophobicity Value -0.251
Molecular Weight (kDa) 95.2
Isoelectric Point (pI) 5.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000089 (1199 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4958
Search term: ATPase AAA

Human Homologs

Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.7e-38
Percent Identity: 34.6
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.7e-38
Percent Identity: 34.6
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.7e-38
Percent Identity: 34.6
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.7e-38
Percent Identity: 34.6
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.7e-38
Percent Identity: 34.6

References

No references are associated with this feature.