Pseudomonas syringae pv. syringae B728a, Psyr_5016

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_5016
Name
Replicon chromosome
Genomic location 5957679 - 5958800 (+ strand)

Cross-References

RefSeq YP_238081.1
GI 66048240
Entrez 3370574
INSDC AAY40043.1
NCBI Locus Tag Psyr_5016
UniParc UPI0000394E57
UniProtKB Acc Q4ZLC9
UniProtKB ID Q4ZLC9_PSEU2
UniRef100 UniRef100_Q4ZLC9
UniRef50 UniRef50_Q2RSB2
UniRef90 UniRef90_Q48BS0

Product

Feature Type CDS
Coding Frame 1
Product Name
alanine dehydrogenase/PNT
Synonyms
Evidence for Translation
Charge (pH 7) -5.19
Kyte-Doolittle Hydrophobicity Value 0.218
Molecular Weight (kDa) 38963.5
Isoelectric Point (pI) 5.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 462 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000193 (525 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_5016

Human Homologs

Ensembl 110, assembly GRCh38.p14
nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
E-value: 2.7e-66
Percent Identity: 39.0
Ensembl 110, assembly GRCh38.p14
nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
E-value: 2.7e-66
Percent Identity: 39.0
Ensembl 110, assembly GRCh38.p14
nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
E-value: 2.7e-66
Percent Identity: 39.0
Ensembl 110, assembly GRCh38.p14
nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
E-value: 2.7e-66
Percent Identity: 39.0
Ensembl 110, assembly GRCh38.p14
nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
E-value: 2.7e-66
Percent Identity: 39.0
Ensembl 110, assembly GRCh38.p14
nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
E-value: 2.7e-66
Percent Identity: 39.0
Ensembl 110, assembly GRCh38.p14
nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
E-value: 2.7e-66
Percent Identity: 39.0
Ensembl 110, assembly GRCh38.p14
nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
E-value: 2.7e-66
Percent Identity: 39.0
Ensembl 110, assembly GRCh38.p14
nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
E-value: 2.7e-66
Percent Identity: 39.0
Ensembl 110, assembly GRCh38.p14
nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
E-value: 2.7e-66
Percent Identity: 39.0

References

No references are associated with this feature.